Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Gm14760-201ENSMUST00000121831 999 ntBASIC13.43□□□□□ -0.26
TraipQ8VIG6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TraipQ8VIG6 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Mir7070-201ENSMUST00000183657 86 ntBASIC13.43□□□□□ -0.26
TraipQ8VIG6 Gm18827-201ENSMUST00000188341 790 ntBASIC13.43□□□□□ -0.26
TraipQ8VIG6 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Gm42937-201ENSMUST00000197360 752 ntBASIC13.43□□□□□ -0.26
TraipQ8VIG6 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.43□□□□□ -0.26
TraipQ8VIG6 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.43□□□□□ -0.26
TraipQ8VIG6 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.43□□□□□ -0.26
TraipQ8VIG6 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Gm44745-201ENSMUST00000206563 2723 ntBASIC13.43□□□□□ -0.26
TraipQ8VIG6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TraipQ8VIG6 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.42□□□□□ -0.26
TraipQ8VIG6 AC154186.1-201ENSMUST00000227711 1597 ntBASIC13.42□□□□□ -0.26
TraipQ8VIG6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Gm14028-201ENSMUST00000117434 479 ntBASIC13.42□□□□□ -0.26
TraipQ8VIG6 Gm7857-201ENSMUST00000117957 358 ntBASIC13.42□□□□□ -0.26
TraipQ8VIG6 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Gm25700-201ENSMUST00000177693 110 ntBASIC13.42□□□□□ -0.26
TraipQ8VIG6 Gm9230-201ENSMUST00000188228 532 ntBASIC13.42□□□□□ -0.26
TraipQ8VIG6 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC13.42□□□□□ -0.26
TraipQ8VIG6 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.42□□□□□ -0.26
TraipQ8VIG6 Gm45598-202ENSMUST00000210719 986 ntBASIC13.42□□□□□ -0.26
TraipQ8VIG6 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.42□□□□□ -0.26
TraipQ8VIG6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TraipQ8VIG6 1700019C18Rik-203ENSMUST00000222085 1766 ntTSL 5 BASIC13.42□□□□□ -0.26
TraipQ8VIG6 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TraipQ8VIG6 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms