Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Q8VDP2 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Q8VDP2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Q8VDP2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.23□□□□□ -0.45
Q8VDP2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.23□□□□□ -0.45
Q8VDP2 Auts2-212ENSMUST00000178555 309 ntBASIC12.23□□□□□ -0.45
Q8VDP2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.23□□□□□ -0.45
Q8VDP2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.23□□□□□ -0.45
Q8VDP2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Q8VDP2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.23□□□□□ -0.45
Q8VDP2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC12.23□□□□□ -0.45
Q8VDP2 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q8VDP2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Q8VDP2 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.22□□□□□ -0.45
Q8VDP2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Gm43636-201ENSMUST00000201501 2235 ntBASIC12.22□□□□□ -0.45
Q8VDP2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Q8VDP2 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.22□□□□□ -0.45
Q8VDP2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Q8VDP2 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Q8VDP2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Gm11745-201ENSMUST00000121669 448 ntBASIC12.22□□□□□ -0.45
Q8VDP2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.22□□□□□ -0.45
Q8VDP2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Q8VDP2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.22□□□□□ -0.45
Q8VDP2 Gm44335-201ENSMUST00000196879 141 ntBASIC12.22□□□□□ -0.45
Q8VDP2 Gm44297-201ENSMUST00000198304 141 ntBASIC12.22□□□□□ -0.45
Q8VDP2 Gm44346-201ENSMUST00000198851 141 ntBASIC12.22□□□□□ -0.45
Q8VDP2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.22□□□□□ -0.45
Q8VDP2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.22□□□□□ -0.45
Q8VDP2 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.22□□□□□ -0.45
Q8VDP2 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.22□□□□□ -0.45
Q8VDP2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.22□□□□□ -0.45
Q8VDP2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.22□□□□□ -0.45
Q8VDP2 Gm10154-201ENSMUST00000084445 354 ntBASIC12.22□□□□□ -0.45
Q8VDP2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Q8VDP2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Q8VDP2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Q8VDP2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Q8VDP2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Q8VDP2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q8VDP2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Q8VDP2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Q8VDP2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Q8VDP2 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC12.21□□□□□ -0.45
Q8VDP2 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms