Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Daam2-202ENSMUST00000224595 1926 ntBASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Gm15236-201ENSMUST00000117309 379 ntBASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Gm25668-201ENSMUST00000157700 129 ntBASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Gm2546-201ENSMUST00000182630 991 ntBASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ndc1Q8VCB1 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Mir339-201ENSMUST00000083659 96 ntBASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ndc1Q8VCB1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Gm11531-201ENSMUST00000117614 555 ntBASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Gm14726-201ENSMUST00000120623 896 ntBASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Ndc1Q8VCB1 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms