Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Lsm1Q8VC85 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Gm24231-201ENSMUST00000104315 133 ntBASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Gm38092-201ENSMUST00000195600 653 ntBASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lsm1Q8VC85 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Gm12384-201ENSMUST00000119228 919 ntBASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Gm7029-201ENSMUST00000173226 450 ntBASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Gm9002-201ENSMUST00000178437 499 ntBASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.05□□□□□ -0.48
Lsm1Q8VC85 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lsm1Q8VC85 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm1Q8VC85 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms