Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Gm12341-201ENSMUST00000119724 503 ntBASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nudcd3Q8R1N4 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Gm14921-201ENSMUST00000118643 908 ntBASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nudcd3Q8R1N4 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nudcd3Q8R1N4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nudcd3Q8R1N4 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nudcd3Q8R1N4 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.52□□□□□ -0.4
Nudcd3Q8R1N4 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nudcd3Q8R1N4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nudcd3Q8R1N4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nudcd3Q8R1N4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Nudcd3Q8R1N4 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nudcd3Q8R1N4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Nudcd3Q8R1N4 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.52□□□□□ -0.4
Nudcd3Q8R1N4 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.52□□□□□ -0.41
Nudcd3Q8R1N4 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.52□□□□□ -0.41
Nudcd3Q8R1N4 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nudcd3Q8R1N4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Nudcd3Q8R1N4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nudcd3Q8R1N4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.52□□□□□ -0.41
Nudcd3Q8R1N4 Gm6152-201ENSMUST00000151704 340 ntBASIC12.52□□□□□ -0.41
Nudcd3Q8R1N4 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Nudcd3Q8R1N4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Nudcd3Q8R1N4 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nudcd3Q8R1N4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Nudcd3Q8R1N4 Mir6956-201ENSMUST00000183598 62 ntBASIC12.52□□□□□ -0.41
Nudcd3Q8R1N4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms