Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim52Q8CDV4 Gm28719-201ENSMUST00000187779 1757 ntBASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Gm13045-201ENSMUST00000119019 712 ntBASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Gm18711-201ENSMUST00000199341 750 ntBASIC15.41■□□□□ 0.06
Trim52Q8CDV4 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Gm14267-206ENSMUST00000226870 1209 ntBASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 AC171277.1-201ENSMUST00000216902 1441 ntBASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim52Q8CDV4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Gm23596-201ENSMUST00000104304 132 ntBASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Gm9062-201ENSMUST00000117712 727 ntBASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Gm6506-201ENSMUST00000119775 1136 ntBASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Mir7677-201ENSMUST00000184226 67 ntBASIC15.4■□□□□ 0.06
Trim52Q8CDV4 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 CT571245.2-201ENSMUST00000218421 305 ntBASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Gm5847-201ENSMUST00000178959 1595 ntBASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.4■□□□□ 0.06
Trim52Q8CDV4 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trim52Q8CDV4 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms