Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc87Q8CDL9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc87Q8CDL9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.33□□□□□ -0.27
Ccdc87Q8CDL9 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Ccdc87Q8CDL9 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc87Q8CDL9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc87Q8CDL9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc87Q8CDL9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc87Q8CDL9 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.27
Ccdc87Q8CDL9 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Gm25857-201ENSMUST00000082788 129 ntBASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc87Q8CDL9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.32□□□□□ -0.28
Ccdc87Q8CDL9 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc87Q8CDL9 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms