Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Gm18056-201ENSMUST00000207670 568 ntBASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Gm18061-201ENSMUST00000208350 562 ntBASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Gm18063-201ENSMUST00000208529 568 ntBASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Gm18052-201ENSMUST00000208750 559 ntBASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Gm39404-201ENSMUST00000216350 313 ntBASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Gm10076-201ENSMUST00000073238 384 ntBASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf31Q8CCF0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Gm15236-201ENSMUST00000117309 379 ntBASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Gm13570-201ENSMUST00000140763 309 ntBASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Gm3096-201ENSMUST00000185770 364 ntBASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prpf31Q8CCF0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Rmrp-201ENSMUST00000157463 271 ntBASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf31Q8CCF0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms