Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp47Q8BY87 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp47Q8BY87 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC17.65■□□□□ 0.42
Usp47Q8BY87 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp47Q8BY87 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp47Q8BY87 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Usp47Q8BY87 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp47Q8BY87 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Usp47Q8BY87 Gm16570-201ENSMUST00000161951 436 ntBASIC17.65■□□□□ 0.42
Usp47Q8BY87 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Usp47Q8BY87 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp47Q8BY87 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp47Q8BY87 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp47Q8BY87 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Usp47Q8BY87 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp47Q8BY87 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
Usp47Q8BY87 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Crry-ps-201ENSMUST00000079090 1309 ntBASIC17.64■□□□□ 0.41
Usp47Q8BY87 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Gm9361-201ENSMUST00000198695 1507 ntBASIC17.64■□□□□ 0.41
Usp47Q8BY87 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Gm24990-201ENSMUST00000157406 323 ntBASIC17.64■□□□□ 0.41
Usp47Q8BY87 Rn7s1-201ENSMUST00000174924 300 ntBASIC17.64■□□□□ 0.41
Usp47Q8BY87 Rn7s2-201ENSMUST00000175032 300 ntBASIC17.64■□□□□ 0.41
Usp47Q8BY87 Gm26461-201ENSMUST00000175064 290 ntBASIC17.64■□□□□ 0.41
Usp47Q8BY87 Gm27341-201ENSMUST00000183570 106 ntBASIC17.64■□□□□ 0.41
Usp47Q8BY87 Gm37466-201ENSMUST00000195692 652 ntBASIC17.64■□□□□ 0.41
Usp47Q8BY87 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Dhrs4-202ENSMUST00000226168 828 ntBASIC17.64■□□□□ 0.41
Usp47Q8BY87 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC17.64■□□□□ 0.41
Usp47Q8BY87 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp47Q8BY87 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Gm27196-201ENSMUST00000184787 2582 ntBASIC17.63■□□□□ 0.41
Usp47Q8BY87 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp47Q8BY87 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Gm37437-201ENSMUST00000194451 1937 ntBASIC17.62■□□□□ 0.41
Usp47Q8BY87 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Gm11989-201ENSMUST00000117240 672 ntBASIC17.62■□□□□ 0.41
Usp47Q8BY87 Gm11362-201ENSMUST00000118838 850 ntBASIC17.62■□□□□ 0.41
Usp47Q8BY87 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Gm24749-201ENSMUST00000157838 343 ntBASIC17.62■□□□□ 0.41
Usp47Q8BY87 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC17.62■□□□□ 0.41
Usp47Q8BY87 Gm7003-201ENSMUST00000195089 312 ntBASIC17.62■□□□□ 0.41
Usp47Q8BY87 AC159205.5-202ENSMUST00000224849 386 ntBASIC17.62■□□□□ 0.41
Usp47Q8BY87 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms