Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Gm23270-201ENSMUST00000104055 131 ntBASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Gm14381-201ENSMUST00000122105 414 ntBASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.85□□□□□ -0.35
Nup54Q8BTS4 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Gm28882-201ENSMUST00000185504 314 ntBASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Gm24136-201ENSMUST00000083374 165 ntBASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup54Q8BTS4 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nup54Q8BTS4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nup54Q8BTS4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Nup54Q8BTS4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nup54Q8BTS4 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.83□□□□□ -0.35
Nup54Q8BTS4 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Gm42937-201ENSMUST00000197360 752 ntBASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Gm8712-201ENSMUST00000221090 701 ntBASIC12.83□□□□□ -0.36
Nup54Q8BTS4 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.83□□□□□ -0.36
Nup54Q8BTS4 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms