Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Gm11331-201ENSMUST00000119764 288 ntBASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Gm32999-201ENSMUST00000192693 562 ntBASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Gm17812-201ENSMUST00000204935 318 ntBASIC13.31□□□□□ -0.28
Rd3Q8BRE0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rd3Q8BRE0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Gm37986-201ENSMUST00000193285 383 ntBASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Gm7003-201ENSMUST00000195089 312 ntBASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Grk6-205ENSMUST00000224653 2976 ntBASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rd3Q8BRE0 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rd3Q8BRE0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms