Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Gm2231-201ENSMUST00000125661 612 ntBASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cpsf4Q8BQZ5 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Cog3-203ENSMUST00000227473 4197 ntBASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Gm12363-201ENSMUST00000122250 668 ntBASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Gm25261-201ENSMUST00000157416 134 ntBASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Gm17420-201ENSMUST00000164753 153 ntBASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Gm6222-202ENSMUST00000182143 629 ntBASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Gm27572-201ENSMUST00000183702 255 ntBASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Gm42693-201ENSMUST00000196779 631 ntBASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Snora73a-201ENSMUST00000082453 205 ntBASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Gm10478-201ENSMUST00000084451 396 ntBASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cpsf4Q8BQZ5 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4Q8BQZ5 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4Q8BQZ5 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4Q8BQZ5 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4Q8BQZ5 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4Q8BQZ5 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4Q8BQZ5 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4Q8BQZ5 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4Q8BQZ5 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.17□□□□□ -0.46
Cpsf4Q8BQZ5 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Cpsf4Q8BQZ5 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cpsf4Q8BQZ5 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.17□□□□□ -0.46
Cpsf4Q8BQZ5 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cpsf4Q8BQZ5 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.17□□□□□ -0.46
Cpsf4Q8BQZ5 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms