Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.34□□□□□ -0.75
Smco3Q8BQM7 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Gm24447-201ENSMUST00000083977 338 ntBASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smco3Q8BQM7 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Gm5312-201ENSMUST00000203728 547 ntBASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Gm6888-201ENSMUST00000221983 706 ntBASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco3Q8BQM7 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms