Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf38Q8BI21 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf38Q8BI21 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.15□□□□□ -0.47
Rnf38Q8BI21 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Rnf38Q8BI21 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf38Q8BI21 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf38Q8BI21 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.15□□□□□ -0.47
Rnf38Q8BI21 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Rnf38Q8BI21 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Gm9002-201ENSMUST00000178437 499 ntBASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Gm38671-201ENSMUST00000200573 130 ntBASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.14□□□□□ -0.47
Rnf38Q8BI21 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf38Q8BI21 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Gm13369-201ENSMUST00000119442 987 ntBASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Gm15806-201ENSMUST00000120696 955 ntBASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Gm16479-201ENSMUST00000121706 932 ntBASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Gm11424-201ENSMUST00000121929 829 ntBASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Gm10156-201ENSMUST00000122364 462 ntBASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Gm9630-201ENSMUST00000178304 885 ntBASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Gm7287-201ENSMUST00000205267 602 ntBASIC12.13□□□□□ -0.47
Rnf38Q8BI21 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf38Q8BI21 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms