Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Zc3hc1Q80YV2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Zc3hc1Q80YV2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Zc3hc1Q80YV2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Gm14760-201ENSMUST00000121831 999 ntBASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Mir7654-201ENSMUST00000185082 70 ntBASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zc3hc1Q80YV2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Gm14704-201ENSMUST00000120300 874 ntBASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zc3hc1Q80YV2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zc3hc1Q80YV2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Zc3hc1Q80YV2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Zc3hc1Q80YV2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zc3hc1Q80YV2 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Zc3hc1Q80YV2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms