Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp6nlQ80XC3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Gm7467-201ENSMUST00000185173 652 ntBASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.87□□□□□ -0.19
Usp6nlQ80XC3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Rmrp-201ENSMUST00000157463 271 ntBASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Gm18304-201ENSMUST00000189162 546 ntBASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Usp6nlQ80XC3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Usp6nlQ80XC3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp6nlQ80XC3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp6nlQ80XC3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Usp6nlQ80XC3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms