Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc116Q80X53 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc116Q80X53 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc116Q80X53 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc116Q80X53 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc116Q80X53 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc116Q80X53 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc116Q80X53 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc116Q80X53 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc116Q80X53 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc116Q80X53 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Gm6222-202ENSMUST00000182143 629 ntBASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Gm24526-201ENSMUST00000082921 158 ntBASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc116Q80X53 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc116Q80X53 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc116Q80X53 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms