Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vrk1Q80X41 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Vrk1Q80X41 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vrk1Q80X41 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vrk1Q80X41 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Vrk1Q80X41 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vrk1Q80X41 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vrk1Q80X41 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vrk1Q80X41 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vrk1Q80X41 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vrk1Q80X41 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vrk1Q80X41 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vrk1Q80X41 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Vrk1Q80X41 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.03□□□□□ -0.48
Vrk1Q80X41 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.03□□□□□ -0.48
Vrk1Q80X41 Gm16296-201ENSMUST00000159905 325 ntBASIC12.03□□□□□ -0.48
Vrk1Q80X41 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Gm10312-201ENSMUST00000078515 489 ntBASIC12.03□□□□□ -0.48
Vrk1Q80X41 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vrk1Q80X41 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vrk1Q80X41 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Vrk1Q80X41 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vrk1Q80X41 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Vrk1Q80X41 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vrk1Q80X41 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Vrk1Q80X41 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Vrk1Q80X41 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vrk1Q80X41 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vrk1Q80X41 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vrk1Q80X41 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vrk1Q80X41 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Vrk1Q80X41 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.02□□□□□ -0.49
Vrk1Q80X41 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.02□□□□□ -0.49
Vrk1Q80X41 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Gm8385-201ENSMUST00000058999 643 ntBASIC12.02□□□□□ -0.49
Vrk1Q80X41 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vrk1Q80X41 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Vrk1Q80X41 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vrk1Q80X41 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vrk1Q80X41 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vrk1Q80X41 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vrk1Q80X41 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Vrk1Q80X41 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms