Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm45770-201ENSMUST00000212105 616 ntBASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf38bQ80SY5 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Gm11930-201ENSMUST00000117788 190 ntBASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Gm15131-201ENSMUST00000119124 595 ntBASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Gm37102-201ENSMUST00000195740 1105 ntBASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Gm4768-201ENSMUST00000206199 686 ntBASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf38bQ80SY5 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.21□□□□□ -0.3
Prpf38bQ80SY5 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf38bQ80SY5 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf38bQ80SY5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf38bQ80SY5 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.21□□□□□ -0.3
Prpf38bQ80SY5 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.21□□□□□ -0.3
Prpf38bQ80SY5 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf38bQ80SY5 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf38bQ80SY5 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Gm13611-201ENSMUST00000118269 318 ntBASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Gm14208-201ENSMUST00000119645 678 ntBASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf38bQ80SY5 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms