Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.69□□□□□ -0.54
Pif1Q80SX8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.69□□□□□ -0.54
Pif1Q80SX8 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.68□□□□□ -0.54
Pif1Q80SX8 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.68□□□□□ -0.54
Pif1Q80SX8 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Gm44882-201ENSMUST00000205702 802 ntBASIC11.68□□□□□ -0.54
Pif1Q80SX8 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.68□□□□□ -0.54
Pif1Q80SX8 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.68□□□□□ -0.54
Pif1Q80SX8 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.68□□□□□ -0.54
Pif1Q80SX8 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.68□□□□□ -0.54
Pif1Q80SX8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pif1Q80SX8 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pif1Q80SX8 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.67□□□□□ -0.54
Pif1Q80SX8 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Gm22902-201ENSMUST00000158488 302 ntBASIC11.67□□□□□ -0.54
Pif1Q80SX8 Gm25043-201ENSMUST00000158604 212 ntBASIC11.67□□□□□ -0.54
Pif1Q80SX8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.67□□□□□ -0.54
Pif1Q80SX8 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.67□□□□□ -0.54
Pif1Q80SX8 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pif1Q80SX8 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.67□□□□□ -0.54
Pif1Q80SX8 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pif1Q80SX8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms