Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cspg5Q71M36 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Cspg5Q71M36 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cspg5Q71M36 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Cspg5Q71M36 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg5Q71M36 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.08□□□□□ -0.32
Cspg5Q71M36 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg5Q71M36 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Cspg5Q71M36 Gm14726-201ENSMUST00000120623 896 ntBASIC13.08□□□□□ -0.32
Cspg5Q71M36 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.08□□□□□ -0.32
Cspg5Q71M36 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg5Q71M36 Gm22334-201ENSMUST00000158070 133 ntBASIC13.08□□□□□ -0.32
Cspg5Q71M36 Gm24548-201ENSMUST00000158650 108 ntBASIC13.08□□□□□ -0.32
Cspg5Q71M36 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.08□□□□□ -0.32
Cspg5Q71M36 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg5Q71M36 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg5Q71M36 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg5Q71M36 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg5Q71M36 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg5Q71M36 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg5Q71M36 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg5Q71M36 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg5Q71M36 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Cspg5Q71M36 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg5Q71M36 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg5Q71M36 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.07□□□□□ -0.32
Cspg5Q71M36 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Gm11531-201ENSMUST00000117614 555 ntBASIC13.07□□□□□ -0.32
Cspg5Q71M36 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Gm12566-201ENSMUST00000121479 359 ntBASIC13.07□□□□□ -0.32
Cspg5Q71M36 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Gm28450-201ENSMUST00000187349 638 ntBASIC13.07□□□□□ -0.32
Cspg5Q71M36 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.07□□□□□ -0.32
Cspg5Q71M36 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.07□□□□□ -0.32
Cspg5Q71M36 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg5Q71M36 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.06□□□□□ -0.32
Cspg5Q71M36 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg5Q71M36 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg5Q71M36 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Cspg5Q71M36 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg5Q71M36 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg5Q71M36 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cspg5Q71M36 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg5Q71M36 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg5Q71M36 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg5Q71M36 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg5Q71M36 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cspg5Q71M36 Gm25214-201ENSMUST00000104573 129 ntBASIC13.06□□□□□ -0.32
Cspg5Q71M36 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.06□□□□□ -0.32
Cspg5Q71M36 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg5Q71M36 Gm14130-201ENSMUST00000118417 987 ntBASIC13.06□□□□□ -0.32
Cspg5Q71M36 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.06□□□□□ -0.32
Cspg5Q71M36 Gm15276-201ENSMUST00000145953 498 ntBASIC13.06□□□□□ -0.32
Cspg5Q71M36 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cspg5Q71M36 Mir5120-201ENSMUST00000175020 78 ntBASIC13.06□□□□□ -0.32
Cspg5Q71M36 Gm27046-201ENSMUST00000182160 463 ntBASIC13.06□□□□□ -0.32
Cspg5Q71M36 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.06□□□□□ -0.32
Cspg5Q71M36 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg5Q71M36 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cspg5Q71M36 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms