Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.75□□□□□ -0.37
Casc4Q6P2L7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.75□□□□□ -0.37
Casc4Q6P2L7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Casc4Q6P2L7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Casc4Q6P2L7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Casc4Q6P2L7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Casc4Q6P2L7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Casc4Q6P2L7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Casc4Q6P2L7 Gm10478-201ENSMUST00000084451 396 ntBASIC12.75□□□□□ -0.37
Casc4Q6P2L7 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.75□□□□□ -0.37
Casc4Q6P2L7 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Casc4Q6P2L7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.75□□□□□ -0.37
Casc4Q6P2L7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Casc4Q6P2L7 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Casc4Q6P2L7 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.75□□□□□ -0.37
Casc4Q6P2L7 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Casc4Q6P2L7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Gm13492-201ENSMUST00000119772 665 ntBASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Gm38002-201ENSMUST00000193255 180 ntBASIC12.74□□□□□ -0.37
Casc4Q6P2L7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.74□□□□□ -0.37
Casc4Q6P2L7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Gm6023-201ENSMUST00000118217 606 ntBASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Gm42627-201ENSMUST00000197347 224 ntBASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Gm24526-201ENSMUST00000082921 158 ntBASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Casc4Q6P2L7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms