Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.77□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC9.77□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.77□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm5303-201ENSMUST00000117943 1252 ntBASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm16342-201ENSMUST00000124025 1025 ntBASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm9797-201ENSMUST00000052902 613 ntBASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm16372-201ENSMUST00000073088 450 ntBASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm18227-201ENSMUST00000211082 1468 ntBASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Cog3-203ENSMUST00000227473 4197 ntBASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Itm2b-204ENSMUST00000228637 783 ntBASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Mir339-201ENSMUST00000083659 96 ntBASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav15-1-dv6-1Q5R1D2 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms