Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Gm9022-201ENSMUST00000182482 992 ntBASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Gm37835-201ENSMUST00000193305 361 ntBASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Gm9555-201ENSMUST00000200908 583 ntBASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upf3aQ3ULJ3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Gm24231-201ENSMUST00000104315 133 ntBASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Gm15515-201ENSMUST00000117827 822 ntBASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upf3aQ3ULJ3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upf3aQ3ULJ3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms