Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 Gm8099-201ENSMUST00000200510 742 ntBASIC12.34□□□□□ -0.43
Q3KNL4 Gm45384-201ENSMUST00000210451 277 ntBASIC12.34□□□□□ -0.43
Q3KNL4 Gm9908-201ENSMUST00000211534 448 ntBASIC12.34□□□□□ -0.43
Q3KNL4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 Gm5356-201ENSMUST00000093326 615 ntBASIC12.34□□□□□ -0.43
Q3KNL4 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.34□□□□□ -0.43
Q3KNL4 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Q3KNL4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Q3KNL4 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.34□□□□□ -0.43
Q3KNL4 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q3KNL4 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Q3KNL4 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Q3KNL4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Q3KNL4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Q3KNL4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Q3KNL4 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Gm13369-201ENSMUST00000119442 987 ntBASIC12.33□□□□□ -0.44
Q3KNL4 Gm2231-201ENSMUST00000125661 612 ntBASIC12.33□□□□□ -0.44
Q3KNL4 Gm8810-201ENSMUST00000172895 754 ntBASIC12.33□□□□□ -0.44
Q3KNL4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.33□□□□□ -0.44
Q3KNL4 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Gm26035-201ENSMUST00000083065 308 ntBASIC12.33□□□□□ -0.44
Q3KNL4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Q3KNL4 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.33□□□□□ -0.44
Q3KNL4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.33□□□□□ -0.44
Q3KNL4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Q3KNL4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Q3KNL4 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.32□□□□□ -0.44
Q3KNL4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Q3KNL4 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Q3KNL4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Q3KNL4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Q3KNL4 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.32□□□□□ -0.44
Q3KNL4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.32□□□□□ -0.44
Q3KNL4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Q3KNL4 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.32□□□□□ -0.44
Q3KNL4 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Q3KNL4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.32□□□□□ -0.44
Q3KNL4 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.32□□□□□ -0.44
Q3KNL4 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.32□□□□□ -0.44
Q3KNL4 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.32□□□□□ -0.44
Q3KNL4 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Q3KNL4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Q3KNL4 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.32□□□□□ -0.44
Q3KNL4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Q3KNL4 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Q3KNL4 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms