Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 AC238940.1-201ENSMUST00000225106 1858 ntBASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Gm5419-201ENSMUST00000119301 527 ntBASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Gm9089-201ENSMUST00000122027 526 ntBASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Gm17147-201ENSMUST00000164176 432 ntBASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Capsl-202ENSMUST00000226688 739 ntBASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Gm5705-201ENSMUST00000066241 711 ntBASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Gm5308-201ENSMUST00000196752 1354 ntBASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Gm5989-201ENSMUST00000096092 2077 ntBASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Gm6108-201ENSMUST00000208365 367 ntBASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 AC164702.1-201ENSMUST00000220135 2212 ntBASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ush2AQ2QI47 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm42872-201ENSMUST00000200026 1967 ntBASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Mir1249-201ENSMUST00000116791 98 ntBASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Ighv1-11-201ENSMUST00000191801 351 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm42908-201ENSMUST00000197508 870 ntBASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm15636-201ENSMUST00000119205 668 ntBASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm5254-201ENSMUST00000188353 977 ntBASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm38151-201ENSMUST00000195085 289 ntBASIC6.41□□□□□ -1.38
Ush2AQ2QI47 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC6.41□□□□□ -1.38
Ush2AQ2QI47 AC129217.1-201ENSMUST00000225181 642 ntBASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm5278-201ENSMUST00000055957 552 ntBASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm13034-201ENSMUST00000121342 3177 ntBASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm22495-201ENSMUST00000104492 126 ntBASIC6.41□□□□□ -1.38
Ush2AQ2QI47 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm8643-201ENSMUST00000195228 625 ntBASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm44616-201ENSMUST00000206417 1732 ntBASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ush2AQ2QI47 Gm4782-201ENSMUST00000168705 2046 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms