Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox9Q04887 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.98□□□□□ -0.33
Sox9Q04887 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.98□□□□□ -0.33
Sox9Q04887 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox9Q04887 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox9Q04887 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox9Q04887 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Sox9Q04887 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sox9Q04887 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.97□□□□□ -0.33
Sox9Q04887 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox9Q04887 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox9Q04887 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sox9Q04887 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sox9Q04887 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.97□□□□□ -0.33
Sox9Q04887 Gm12899-201ENSMUST00000120565 551 ntBASIC12.97□□□□□ -0.33
Sox9Q04887 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.97□□□□□ -0.33
Sox9Q04887 Gm22442-201ENSMUST00000157256 144 ntBASIC12.97□□□□□ -0.33
Sox9Q04887 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.97□□□□□ -0.33
Sox9Q04887 Gm22877-201ENSMUST00000175451 105 ntBASIC12.97□□□□□ -0.33
Sox9Q04887 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.97□□□□□ -0.33
Sox9Q04887 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.97□□□□□ -0.33
Sox9Q04887 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.97□□□□□ -0.33
Sox9Q04887 Gm17831-201ENSMUST00000205579 900 ntBASIC12.97□□□□□ -0.33
Sox9Q04887 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.97□□□□□ -0.33
Sox9Q04887 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.97□□□□□ -0.33
Sox9Q04887 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox9Q04887 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox9Q04887 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Sox9Q04887 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sox9Q04887 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox9Q04887 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sox9Q04887 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox9Q04887 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox9Q04887 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Sox9Q04887 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox9Q04887 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Sox9Q04887 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.33
Sox9Q04887 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox9Q04887 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox9Q04887 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox9Q04887 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.96□□□□□ -0.33
Sox9Q04887 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sox9Q04887 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.96□□□□□ -0.33
Sox9Q04887 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox9Q04887 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox9Q04887 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox9Q04887 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox9Q04887 Gm13315-201ENSMUST00000120376 991 ntBASIC12.96□□□□□ -0.33
Sox9Q04887 Gm14585-201ENSMUST00000120713 634 ntBASIC12.96□□□□□ -0.33
Sox9Q04887 Gm13182-201ENSMUST00000122241 312 ntBASIC12.96□□□□□ -0.33
Sox9Q04887 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox9Q04887 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.96□□□□□ -0.33
Sox9Q04887 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.96□□□□□ -0.33
Sox9Q04887 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox9Q04887 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Sox9Q04887 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.96□□□□□ -0.33
Sox9Q04887 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.96□□□□□ -0.33
Sox9Q04887 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox9Q04887 Mir339-201ENSMUST00000083659 96 ntBASIC12.96□□□□□ -0.33
Sox9Q04887 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.96□□□□□ -0.33
Sox9Q04887 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox9Q04887 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.96□□□□□ -0.33
Sox9Q04887 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox9Q04887 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sox9Q04887 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox9Q04887 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sox9Q04887 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox9Q04887 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sox9Q04887 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms