Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.89□□□□□ -0.19
Col6a1Q04857 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Col6a1Q04857 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a1Q04857 Gm37201-201ENSMUST00000191845 523 ntBASIC13.89□□□□□ -0.19
Col6a1Q04857 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.89□□□□□ -0.19
Col6a1Q04857 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.89□□□□□ -0.19
Col6a1Q04857 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.89□□□□□ -0.19
Col6a1Q04857 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Col6a1Q04857 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a1Q04857 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a1Q04857 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a1Q04857 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a1Q04857 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a1Q04857 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a1Q04857 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a1Q04857 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a1Q04857 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Col6a1Q04857 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a1Q04857 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.89□□□□□ -0.19
Col6a1Q04857 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a1Q04857 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a1Q04857 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a1Q04857 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a1Q04857 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a1Q04857 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a1Q04857 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Col6a1Q04857 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.88□□□□□ -0.19
Col6a1Q04857 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Col6a1Q04857 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.88□□□□□ -0.19
Col6a1Q04857 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Col6a1Q04857 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Col6a1Q04857 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.88□□□□□ -0.19
Col6a1Q04857 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.88□□□□□ -0.19
Col6a1Q04857 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col6a1Q04857 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.88□□□□□ -0.19
Col6a1Q04857 Mir6958-201ENSMUST00000184207 73 ntBASIC13.88□□□□□ -0.19
Col6a1Q04857 Gm19353-201ENSMUST00000184561 445 ntBASIC13.88□□□□□ -0.19
Col6a1Q04857 Gm32999-201ENSMUST00000192693 562 ntBASIC13.88□□□□□ -0.19
Col6a1Q04857 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.88□□□□□ -0.19
Col6a1Q04857 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.88□□□□□ -0.19
Col6a1Q04857 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.88□□□□□ -0.19
Col6a1Q04857 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Gm45925-201ENSMUST00000218882 744 ntBASIC13.88□□□□□ -0.19
Col6a1Q04857 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.88□□□□□ -0.19
Col6a1Q04857 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.88□□□□□ -0.19
Col6a1Q04857 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.88□□□□□ -0.19
Col6a1Q04857 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a1Q04857 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.87□□□□□ -0.19
Col6a1Q04857 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.87□□□□□ -0.19
Col6a1Q04857 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col6a1Q04857 Gm16397-201ENSMUST00000122201 494 ntBASIC13.87□□□□□ -0.19
Col6a1Q04857 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.87□□□□□ -0.19
Col6a1Q04857 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.87□□□□□ -0.19
Col6a1Q04857 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.87□□□□□ -0.19
Col6a1Q04857 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.87□□□□□ -0.19
Col6a1Q04857 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col6a1Q04857 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Col6a1Q04857 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Col6a1Q04857 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
Col6a1Q04857 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col6a1Q04857 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a1Q04857 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.87□□□□□ -0.19
Col6a1Q04857 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms