Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcr5Q04683 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.93□□□□□ -0.5
Cxcr5Q04683 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Snord83b-201ENSMUST00000104546 94 ntBASIC11.93□□□□□ -0.5
Cxcr5Q04683 Gm12384-201ENSMUST00000119228 919 ntBASIC11.93□□□□□ -0.5
Cxcr5Q04683 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.93□□□□□ -0.5
Cxcr5Q04683 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Gm37497-201ENSMUST00000195830 798 ntBASIC11.93□□□□□ -0.5
Cxcr5Q04683 Gm18018-201ENSMUST00000198273 408 ntBASIC11.93□□□□□ -0.5
Cxcr5Q04683 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.93□□□□□ -0.5
Cxcr5Q04683 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.93□□□□□ -0.5
Cxcr5Q04683 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cxcr5Q04683 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cxcr5Q04683 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cxcr5Q04683 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.92□□□□□ -0.5
Cxcr5Q04683 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.92□□□□□ -0.5
Cxcr5Q04683 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Gm24231-201ENSMUST00000104315 133 ntBASIC11.92□□□□□ -0.5
Cxcr5Q04683 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.92□□□□□ -0.5
Cxcr5Q04683 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.92□□□□□ -0.5
Cxcr5Q04683 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.92□□□□□ -0.5
Cxcr5Q04683 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.92□□□□□ -0.5
Cxcr5Q04683 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Gm42599-201ENSMUST00000201308 469 ntBASIC11.92□□□□□ -0.5
Cxcr5Q04683 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.92□□□□□ -0.5
Cxcr5Q04683 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cxcr5Q04683 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms