Protein–RNA interactions for Protein: Q02780

Nfia, Nuclear factor 1 A-type, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfiaQ02780 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NfiaQ02780 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NfiaQ02780 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NfiaQ02780 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NfiaQ02780 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NfiaQ02780 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NfiaQ02780 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NfiaQ02780 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NfiaQ02780 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.03□□□□□ -0.16
NfiaQ02780 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NfiaQ02780 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NfiaQ02780 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NfiaQ02780 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NfiaQ02780 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NfiaQ02780 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NfiaQ02780 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NfiaQ02780 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.03□□□□□ -0.16
NfiaQ02780 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NfiaQ02780 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NfiaQ02780 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NfiaQ02780 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NfiaQ02780 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NfiaQ02780 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NfiaQ02780 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NfiaQ02780 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NfiaQ02780 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NfiaQ02780 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NfiaQ02780 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NfiaQ02780 Rubie-203ENSMUST00000227803 2430 ntBASIC14.02□□□□□ -0.16
NfiaQ02780 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NfiaQ02780 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.02□□□□□ -0.16
NfiaQ02780 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NfiaQ02780 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.02□□□□□ -0.16
NfiaQ02780 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NfiaQ02780 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NfiaQ02780 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NfiaQ02780 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NfiaQ02780 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NfiaQ02780 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
NfiaQ02780 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NfiaQ02780 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NfiaQ02780 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NfiaQ02780 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NfiaQ02780 Gm11450-201ENSMUST00000121144 333 ntBASIC14.02□□□□□ -0.17
NfiaQ02780 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.02□□□□□ -0.17
NfiaQ02780 Gm5616-201ENSMUST00000165252 384 ntBASIC14.02□□□□□ -0.17
NfiaQ02780 Gm8741-201ENSMUST00000174736 384 ntBASIC14.02□□□□□ -0.17
NfiaQ02780 Gm9230-201ENSMUST00000188228 532 ntBASIC14.02□□□□□ -0.17
NfiaQ02780 Gm28071-201ENSMUST00000190355 478 ntBASIC14.02□□□□□ -0.17
NfiaQ02780 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NfiaQ02780 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.02□□□□□ -0.17
NfiaQ02780 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NfiaQ02780 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NfiaQ02780 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NfiaQ02780 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.02□□□□□ -0.17
NfiaQ02780 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.02□□□□□ -0.17
NfiaQ02780 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NfiaQ02780 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NfiaQ02780 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NfiaQ02780 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NfiaQ02780 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.02□□□□□ -0.17
NfiaQ02780 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NfiaQ02780 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NfiaQ02780 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.02□□□□□ -0.17
NfiaQ02780 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NfiaQ02780 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NfiaQ02780 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NfiaQ02780 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NfiaQ02780 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.02□□□□□ -0.17
NfiaQ02780 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NfiaQ02780 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NfiaQ02780 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NfiaQ02780 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NfiaQ02780 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.01□□□□□ -0.17
NfiaQ02780 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NfiaQ02780 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.01□□□□□ -0.17
NfiaQ02780 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NfiaQ02780 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.01□□□□□ -0.17
NfiaQ02780 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.01□□□□□ -0.17
NfiaQ02780 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NfiaQ02780 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NfiaQ02780 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NfiaQ02780 Gm13408-201ENSMUST00000119822 798 ntBASIC14.01□□□□□ -0.17
NfiaQ02780 Gm13935-201ENSMUST00000121859 798 ntBASIC14.01□□□□□ -0.17
NfiaQ02780 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.01□□□□□ -0.17
NfiaQ02780 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NfiaQ02780 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.01□□□□□ -0.17
NfiaQ02780 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NfiaQ02780 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.01□□□□□ -0.17
NfiaQ02780 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NfiaQ02780 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.01□□□□□ -0.17
NfiaQ02780 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.01□□□□□ -0.17
NfiaQ02780 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.01□□□□□ -0.17
NfiaQ02780 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.01□□□□□ -0.17
NfiaQ02780 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.01□□□□□ -0.17
NfiaQ02780 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NfiaQ02780 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NfiaQ02780 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.01□□□□□ -0.17
NfiaQ02780 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NfiaQ02780 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms