Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GabpaQ00422 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GabpaQ00422 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GabpaQ00422 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GabpaQ00422 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GabpaQ00422 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GabpaQ00422 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GabpaQ00422 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.23□□□□□ -0.13
GabpaQ00422 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.23□□□□□ -0.13
GabpaQ00422 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
GabpaQ00422 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
GabpaQ00422 Gm12566-201ENSMUST00000121479 359 ntBASIC14.23□□□□□ -0.13
GabpaQ00422 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.23□□□□□ -0.13
GabpaQ00422 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.23□□□□□ -0.13
GabpaQ00422 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.23□□□□□ -0.13
GabpaQ00422 Gm3786-201ENSMUST00000202659 378 ntBASIC14.23□□□□□ -0.13
GabpaQ00422 Gm17812-201ENSMUST00000204935 318 ntBASIC14.23□□□□□ -0.13
GabpaQ00422 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GabpaQ00422 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.23□□□□□ -0.13
GabpaQ00422 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.23□□□□□ -0.13
GabpaQ00422 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.23□□□□□ -0.13
GabpaQ00422 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GabpaQ00422 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.22□□□□□ -0.13
GabpaQ00422 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
GabpaQ00422 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
GabpaQ00422 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
GabpaQ00422 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.22□□□□□ -0.13
GabpaQ00422 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.22□□□□□ -0.13
GabpaQ00422 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.22□□□□□ -0.13
GabpaQ00422 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.22□□□□□ -0.13
GabpaQ00422 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.22□□□□□ -0.13
GabpaQ00422 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.22□□□□□ -0.13
GabpaQ00422 Gm27552-201ENSMUST00000183351 62 ntBASIC14.22□□□□□ -0.13
GabpaQ00422 Gm27844-201ENSMUST00000183613 62 ntBASIC14.22□□□□□ -0.13
GabpaQ00422 Gm9230-201ENSMUST00000188228 532 ntBASIC14.22□□□□□ -0.13
GabpaQ00422 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.22□□□□□ -0.13
GabpaQ00422 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.22□□□□□ -0.13
GabpaQ00422 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.22□□□□□ -0.13
GabpaQ00422 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
GabpaQ00422 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.22□□□□□ -0.13
GabpaQ00422 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.22□□□□□ -0.13
GabpaQ00422 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.22□□□□□ -0.13
GabpaQ00422 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.22□□□□□ -0.13
GabpaQ00422 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.22□□□□□ -0.13
GabpaQ00422 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.22□□□□□ -0.13
GabpaQ00422 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GabpaQ00422 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GabpaQ00422 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GabpaQ00422 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GabpaQ00422 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GabpaQ00422 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
GabpaQ00422 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
GabpaQ00422 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GabpaQ00422 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GabpaQ00422 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
GabpaQ00422 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms