Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.56□□□□□ -0.72
Npas1P97459 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.56□□□□□ -0.72
Npas1P97459 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Gm24447-201ENSMUST00000083977 338 ntBASIC10.56□□□□□ -0.72
Npas1P97459 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Npas1P97459 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.56□□□□□ -0.72
Npas1P97459 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Npas1P97459 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.56□□□□□ -0.72
Npas1P97459 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Npas1P97459 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.55□□□□□ -0.72
Npas1P97459 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Npas1P97459 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.55□□□□□ -0.72
Npas1P97459 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.55□□□□□ -0.72
Npas1P97459 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.55□□□□□ -0.72
Npas1P97459 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Npas1P97459 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Npas1P97459 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.55□□□□□ -0.72
Npas1P97459 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.55□□□□□ -0.72
Npas1P97459 Gm12485-201ENSMUST00000119641 291 ntBASIC10.55□□□□□ -0.72
Npas1P97459 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.55□□□□□ -0.72
Npas1P97459 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.55□□□□□ -0.72
Npas1P97459 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.55□□□□□ -0.72
Npas1P97459 Gm9063-201ENSMUST00000223299 582 ntBASIC10.55□□□□□ -0.72
Npas1P97459 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Gm8396-201ENSMUST00000057361 823 ntBASIC10.55□□□□□ -0.72
Npas1P97459 Gm5161-201ENSMUST00000075243 853 ntBASIC10.55□□□□□ -0.72
Npas1P97459 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Npas1P97459 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Npas1P97459 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.55□□□□□ -0.72
Npas1P97459 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.55□□□□□ -0.72
Npas1P97459 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.55□□□□□ -0.72
Npas1P97459 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Npas1P97459 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Npas1P97459 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.55□□□□□ -0.72
Npas1P97459 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Npas1P97459 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Npas1P97459 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Npas1P97459 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.54□□□□□ -0.72
Npas1P97459 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.54□□□□□ -0.72
Npas1P97459 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.54□□□□□ -0.72
Npas1P97459 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Npas1P97459 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms