Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SgcbP82349 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SgcbP82349 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SgcbP82349 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.24□□□□□ -0.61
SgcbP82349 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.24□□□□□ -0.61
SgcbP82349 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SgcbP82349 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SgcbP82349 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SgcbP82349 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.23□□□□□ -0.61
SgcbP82349 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SgcbP82349 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.23□□□□□ -0.61
SgcbP82349 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC11.23□□□□□ -0.61
SgcbP82349 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.23□□□□□ -0.61
SgcbP82349 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.23□□□□□ -0.61
SgcbP82349 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.23□□□□□ -0.61
SgcbP82349 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.23□□□□□ -0.61
SgcbP82349 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 AC154634.3-201ENSMUST00000224589 736 ntBASIC11.23□□□□□ -0.61
SgcbP82349 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.23□□□□□ -0.61
SgcbP82349 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.23□□□□□ -0.61
SgcbP82349 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.23□□□□□ -0.61
SgcbP82349 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SgcbP82349 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SgcbP82349 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
SgcbP82349 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SgcbP82349 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.23□□□□□ -0.61
SgcbP82349 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SgcbP82349 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.23□□□□□ -0.61
SgcbP82349 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
SgcbP82349 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcbP82349 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
SgcbP82349 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SgcbP82349 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.22□□□□□ -0.61
SgcbP82349 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SgcbP82349 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Gm4986-201ENSMUST00000119731 549 ntBASIC11.22□□□□□ -0.61
SgcbP82349 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.22□□□□□ -0.61
SgcbP82349 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcbP82349 Gm38158-201ENSMUST00000194617 339 ntBASIC11.22□□□□□ -0.61
SgcbP82349 Gm44364-201ENSMUST00000198368 141 ntBASIC11.22□□□□□ -0.61
SgcbP82349 Gm43179-201ENSMUST00000198797 275 ntBASIC11.22□□□□□ -0.61
SgcbP82349 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.22□□□□□ -0.61
SgcbP82349 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms