Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Shox2P70390 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.38□□□□□ -0.43
Shox2P70390 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.38□□□□□ -0.43
Shox2P70390 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Shox2P70390 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Shox2P70390 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Shox2P70390 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Shox2P70390 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.38□□□□□ -0.43
Shox2P70390 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.38□□□□□ -0.43
Shox2P70390 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.38□□□□□ -0.43
Shox2P70390 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.38□□□□□ -0.43
Shox2P70390 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.38□□□□□ -0.43
Shox2P70390 Gm44335-201ENSMUST00000196879 141 ntBASIC12.38□□□□□ -0.43
Shox2P70390 Gm44297-201ENSMUST00000198304 141 ntBASIC12.38□□□□□ -0.43
Shox2P70390 Gm44346-201ENSMUST00000198851 141 ntBASIC12.38□□□□□ -0.43
Shox2P70390 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Shox2P70390 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.38□□□□□ -0.43
Shox2P70390 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Shox2P70390 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Shox2P70390 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.38□□□□□ -0.43
Shox2P70390 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.38□□□□□ -0.43
Shox2P70390 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Shox2P70390 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.38□□□□□ -0.43
Shox2P70390 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shox2P70390 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.37□□□□□ -0.43
Shox2P70390 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.37□□□□□ -0.43
Shox2P70390 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.37□□□□□ -0.43
Shox2P70390 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.37□□□□□ -0.43
Shox2P70390 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Gm24231-201ENSMUST00000104315 133 ntBASIC12.37□□□□□ -0.43
Shox2P70390 Gm14350-201ENSMUST00000116642 640 ntBASIC12.37□□□□□ -0.43
Shox2P70390 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.37□□□□□ -0.43
Shox2P70390 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.37□□□□□ -0.43
Shox2P70390 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Gm18733-201ENSMUST00000173950 856 ntBASIC12.37□□□□□ -0.43
Shox2P70390 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Shox2P70390 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.37□□□□□ -0.43
Shox2P70390 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.37□□□□□ -0.43
Shox2P70390 Gm44069-201ENSMUST00000204898 506 ntBASIC12.37□□□□□ -0.43
Shox2P70390 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.37□□□□□ -0.43
Shox2P70390 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Shox2P70390 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Shox2P70390 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Shox2P70390 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Shox2P70390 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shox2P70390 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Shox2P70390 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shox2P70390 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.36□□□□□ -0.43
Shox2P70390 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Shox2P70390 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.36□□□□□ -0.43
Shox2P70390 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms