Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.34□□□□□ -0.43
Lhx1P63006 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.34□□□□□ -0.43
Lhx1P63006 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lhx1P63006 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lhx1P63006 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Lhx1P63006 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.34□□□□□ -0.43
Lhx1P63006 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Gm14109-201ENSMUST00000118814 309 ntBASIC12.34□□□□□ -0.43
Lhx1P63006 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Gm15276-201ENSMUST00000145953 498 ntBASIC12.34□□□□□ -0.43
Lhx1P63006 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Lhx1P63006 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lhx1P63006 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.34□□□□□ -0.43
Lhx1P63006 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.34□□□□□ -0.43
Lhx1P63006 Gm18304-201ENSMUST00000189162 546 ntBASIC12.34□□□□□ -0.43
Lhx1P63006 Gm4857-201ENSMUST00000192718 785 ntBASIC12.34□□□□□ -0.43
Lhx1P63006 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lhx1P63006 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.34□□□□□ -0.43
Lhx1P63006 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Gm10312-201ENSMUST00000078515 489 ntBASIC12.34□□□□□ -0.43
Lhx1P63006 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx1P63006 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.34□□□□□ -0.43
Lhx1P63006 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lhx1P63006 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Lhx1P63006 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Lhx1P63006 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.33□□□□□ -0.44
Lhx1P63006 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.33□□□□□ -0.44
Lhx1P63006 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Lhx1P63006 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lhx1P63006 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lhx1P63006 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Lhx1P63006 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.33□□□□□ -0.44
Lhx1P63006 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.33□□□□□ -0.44
Lhx1P63006 Gm9022-201ENSMUST00000182482 992 ntBASIC12.33□□□□□ -0.44
Lhx1P63006 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Gm8712-201ENSMUST00000221090 701 ntBASIC12.33□□□□□ -0.44
Lhx1P63006 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.33□□□□□ -0.44
Lhx1P63006 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.33□□□□□ -0.44
Lhx1P63006 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Lhx1P63006 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Lhx1P63006 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx1P63006 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.32□□□□□ -0.44
Lhx1P63006 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Lhx1P63006 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lhx1P63006 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lhx1P63006 Gm24830-201ENSMUST00000102024 166 ntBASIC12.32□□□□□ -0.44
Lhx1P63006 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx1P63006 Gm14832-201ENSMUST00000121289 322 ntBASIC12.32□□□□□ -0.44
Lhx1P63006 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms