Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Lsm6P62313 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.04□□□□□ -0.64
Lsm6P62313 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Lsm6P62313 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Gm24231-201ENSMUST00000104315 133 ntBASIC11.04□□□□□ -0.64
Lsm6P62313 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.04□□□□□ -0.64
Lsm6P62313 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.04□□□□□ -0.64
Lsm6P62313 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.04□□□□□ -0.64
Lsm6P62313 Rmrp-201ENSMUST00000157463 271 ntBASIC11.04□□□□□ -0.64
Lsm6P62313 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.04□□□□□ -0.64
Lsm6P62313 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.04□□□□□ -0.64
Lsm6P62313 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.04□□□□□ -0.64
Lsm6P62313 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.04□□□□□ -0.64
Lsm6P62313 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Lsm6P62313 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Lsm6P62313 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Lsm6P62313 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.04□□□□□ -0.64
Lsm6P62313 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Lsm6P62313 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.04□□□□□ -0.64
Lsm6P62313 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Lsm6P62313 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Lsm6P62313 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lsm6P62313 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Lsm6P62313 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Lsm6P62313 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.03□□□□□ -0.64
Lsm6P62313 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.03□□□□□ -0.64
Lsm6P62313 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Gm11964-201ENSMUST00000120982 444 ntBASIC11.03□□□□□ -0.64
Lsm6P62313 Gm16379-201ENSMUST00000161469 348 ntBASIC11.03□□□□□ -0.64
Lsm6P62313 Gm8762-201ENSMUST00000193486 339 ntBASIC11.03□□□□□ -0.64
Lsm6P62313 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.03□□□□□ -0.64
Lsm6P62313 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.03□□□□□ -0.64
Lsm6P62313 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Lsm6P62313 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.03□□□□□ -0.64
Lsm6P62313 Gm45930-201ENSMUST00000221330 292 ntBASIC11.03□□□□□ -0.64
Lsm6P62313 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Snora73a-201ENSMUST00000082453 205 ntBASIC11.03□□□□□ -0.64
Lsm6P62313 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.03□□□□□ -0.64
Lsm6P62313 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Lsm6P62313 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.03□□□□□ -0.64
Lsm6P62313 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.03□□□□□ -0.64
Lsm6P62313 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Lsm6P62313 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Lsm6P62313 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lsm6P62313 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.03□□□□□ -0.64
Lsm6P62313 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Lsm6P62313 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Lsm6P62313 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lsm6P62313 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lsm6P62313 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lsm6P62313 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Lsm6P62313 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.02□□□□□ -0.64
Lsm6P62313 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lsm6P62313 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.02□□□□□ -0.64
Lsm6P62313 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms