Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Lsm3P62311 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Lsm3P62311 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.41□□□□□ -0.58
Lsm3P62311 Gm17971-201ENSMUST00000190239 806 ntBASIC11.41□□□□□ -0.58
Lsm3P62311 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.41□□□□□ -0.58
Lsm3P62311 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.41□□□□□ -0.58
Lsm3P62311 Gm8227-201ENSMUST00000223306 571 ntBASIC11.41□□□□□ -0.58
Lsm3P62311 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Lsm3P62311 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.41□□□□□ -0.58
Lsm3P62311 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Lsm3P62311 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.41□□□□□ -0.58
Lsm3P62311 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.41□□□□□ -0.58
Lsm3P62311 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm3P62311 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Lsm3P62311 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Gm12585-201ENSMUST00000117307 290 ntBASIC11.4□□□□□ -0.58
Lsm3P62311 Gm6447-201ENSMUST00000118905 835 ntBASIC11.4□□□□□ -0.58
Lsm3P62311 Gm15653-201ENSMUST00000119247 907 ntBASIC11.4□□□□□ -0.58
Lsm3P62311 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Lsm3P62311 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Gm35960-201ENSMUST00000202712 767 ntBASIC11.4□□□□□ -0.58
Lsm3P62311 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.4□□□□□ -0.58
Lsm3P62311 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.4□□□□□ -0.58
Lsm3P62311 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.4□□□□□ -0.58
Lsm3P62311 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Lsm3P62311 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Lsm3P62311 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Lsm3P62311 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm3P62311 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lsm3P62311 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.4□□□□□ -0.59
Lsm3P62311 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lsm3P62311 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Lsm3P62311 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.4□□□□□ -0.59
Lsm3P62311 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Lsm3P62311 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lsm3P62311 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
Lsm3P62311 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lsm3P62311 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.4□□□□□ -0.59
Lsm3P62311 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Lsm3P62311 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lsm3P62311 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lsm3P62311 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Lsm3P62311 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lsm3P62311 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
Lsm3P62311 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.39□□□□□ -0.59
Lsm3P62311 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Lsm3P62311 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.39□□□□□ -0.59
Lsm3P62311 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lsm3P62311 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.39□□□□□ -0.59
Lsm3P62311 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.39□□□□□ -0.59
Lsm3P62311 Gm12260-201ENSMUST00000122447 411 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms