Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sf3b6P59708 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sf3b6P59708 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.16□□□□□ -0.62
Sf3b6P59708 Gm43930-201ENSMUST00000203868 845 ntBASIC11.16□□□□□ -0.62
Sf3b6P59708 Gm32390-201ENSMUST00000212713 1172 ntBASIC11.16□□□□□ -0.62
Sf3b6P59708 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Gm18624-201ENSMUST00000220966 658 ntBASIC11.16□□□□□ -0.62
Sf3b6P59708 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.16□□□□□ -0.62
Sf3b6P59708 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sf3b6P59708 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.16□□□□□ -0.62
Sf3b6P59708 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Sf3b6P59708 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Sf3b6P59708 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.16□□□□□ -0.62
Sf3b6P59708 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sf3b6P59708 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Sf3b6P59708 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Sf3b6P59708 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.15□□□□□ -0.62
Sf3b6P59708 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.15□□□□□ -0.62
Sf3b6P59708 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sf3b6P59708 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Sf3b6P59708 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sf3b6P59708 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Gm12091-201ENSMUST00000146791 830 ntBASIC11.15□□□□□ -0.62
Sf3b6P59708 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Sf3b6P59708 Gm22119-201ENSMUST00000175594 99 ntBASIC11.15□□□□□ -0.62
Sf3b6P59708 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.15□□□□□ -0.62
Sf3b6P59708 Gm45668-201ENSMUST00000211271 493 ntBASIC11.15□□□□□ -0.62
Sf3b6P59708 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.15□□□□□ -0.62
Sf3b6P59708 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.15□□□□□ -0.62
Sf3b6P59708 AC132446.1-201ENSMUST00000222655 226 ntBASIC11.15□□□□□ -0.62
Sf3b6P59708 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.15□□□□□ -0.62
Sf3b6P59708 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.15□□□□□ -0.62
Sf3b6P59708 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.15□□□□□ -0.62
Sf3b6P59708 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.15□□□□□ -0.62
Sf3b6P59708 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.15□□□□□ -0.62
Sf3b6P59708 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3b6P59708 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Sf3b6P59708 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.15□□□□□ -0.63
Sf3b6P59708 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sf3b6P59708 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Sf3b6P59708 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sf3b6P59708 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sf3b6P59708 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.14□□□□□ -0.63
Sf3b6P59708 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sf3b6P59708 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.14□□□□□ -0.63
Sf3b6P59708 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.14□□□□□ -0.63
Sf3b6P59708 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.14□□□□□ -0.63
Sf3b6P59708 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sf3b6P59708 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3b6P59708 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.14□□□□□ -0.63
Sf3b6P59708 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms