Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.88□□□□□ -0.51
Nup43P59235 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.88□□□□□ -0.51
Nup43P59235 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nup43P59235 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nup43P59235 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.87□□□□□ -0.51
Nup43P59235 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Nup43P59235 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.87□□□□□ -0.51
Nup43P59235 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nup43P59235 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Gm13786-201ENSMUST00000122371 333 ntBASIC11.87□□□□□ -0.51
Nup43P59235 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.87□□□□□ -0.51
Nup43P59235 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Nup43P59235 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.87□□□□□ -0.51
Nup43P59235 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.87□□□□□ -0.51
Nup43P59235 Gm29396-201ENSMUST00000185659 716 ntBASIC11.87□□□□□ -0.51
Nup43P59235 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.87□□□□□ -0.51
Nup43P59235 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nup43P59235 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nup43P59235 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.86□□□□□ -0.51
Nup43P59235 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Nup43P59235 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nup43P59235 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.86□□□□□ -0.51
Nup43P59235 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nup43P59235 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Gm13736-201ENSMUST00000119272 253 ntBASIC11.86□□□□□ -0.51
Nup43P59235 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nup43P59235 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.86□□□□□ -0.51
Nup43P59235 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Nup43P59235 Olfr284-202ENSMUST00000206647 966 ntBASIC11.86□□□□□ -0.51
Nup43P59235 Gm18935-201ENSMUST00000212692 664 ntBASIC11.86□□□□□ -0.51
Nup43P59235 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.86□□□□□ -0.51
Nup43P59235 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Nup43P59235 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nup43P59235 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nup43P59235 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nup43P59235 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.86□□□□□ -0.51
Nup43P59235 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.86□□□□□ -0.51
Nup43P59235 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Nup43P59235 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nup43P59235 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nup43P59235 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nup43P59235 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Nup43P59235 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nup43P59235 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms