Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm19220-201ENSMUST00000222682 803 ntBASIC14.01□□□□□ -0.17
Tpm1P58771 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tpm1P58771 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm1P58771 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC14.01□□□□□ -0.17
Tpm1P58771 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm1P58771 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm1P58771 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm1P58771 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm1P58771 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm1P58771 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm1P58771 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm1P58771 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm1P58771 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm1P58771 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tpm1P58771 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tpm1P58771 Gm8617-201ENSMUST00000118796 2222 ntBASIC14□□□□□ -0.17
Tpm1P58771 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Tpm1P58771 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tpm1P58771 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14□□□□□ -0.17
Tpm1P58771 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Gm18916-201ENSMUST00000198264 1246 ntBASIC14□□□□□ -0.17
Tpm1P58771 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14□□□□□ -0.17
Tpm1P58771 AC132863.2-201ENSMUST00000226643 799 ntBASIC14□□□□□ -0.17
Tpm1P58771 AC169036.1-201ENSMUST00000227994 296 ntBASIC14□□□□□ -0.17
Tpm1P58771 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tpm1P58771 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tpm1P58771 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14□□□□□ -0.17
Tpm1P58771 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tpm1P58771 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tpm1P58771 Gm42943-201ENSMUST00000199676 3242 ntBASIC14□□□□□ -0.17
Tpm1P58771 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14□□□□□ -0.17
Tpm1P58771 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14□□□□□ -0.17
Tpm1P58771 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tpm1P58771 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.99□□□□□ -0.17
Tpm1P58771 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tpm1P58771 Gm13689-201ENSMUST00000119360 685 ntBASIC13.99□□□□□ -0.17
Tpm1P58771 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.99□□□□□ -0.17
Tpm1P58771 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.99□□□□□ -0.17
Tpm1P58771 Gm44397-201ENSMUST00000195950 113 ntBASIC13.99□□□□□ -0.17
Tpm1P58771 Gm44069-201ENSMUST00000204898 506 ntBASIC13.99□□□□□ -0.17
Tpm1P58771 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.99□□□□□ -0.17
Tpm1P58771 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.99□□□□□ -0.17
Tpm1P58771 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Tpm1P58771 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Tpm1P58771 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tpm1P58771 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tpm1P58771 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Tpm1P58771 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tpm1P58771 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms