Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.51□□□□□ -0.41
Atxn1P54254 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Atxn1P54254 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.51□□□□□ -0.41
Atxn1P54254 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.5□□□□□ -0.41
Atxn1P54254 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Gm13296-201ENSMUST00000117854 997 ntBASIC12.5□□□□□ -0.41
Atxn1P54254 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.5□□□□□ -0.41
Atxn1P54254 Gm25951-201ENSMUST00000175330 64 ntBASIC12.5□□□□□ -0.41
Atxn1P54254 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.5□□□□□ -0.41
Atxn1P54254 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.5□□□□□ -0.41
Atxn1P54254 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.5□□□□□ -0.41
Atxn1P54254 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Atxn1P54254 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.5□□□□□ -0.41
Atxn1P54254 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Atxn1P54254 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Atxn1P54254 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.5□□□□□ -0.41
Atxn1P54254 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Atxn1P54254 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Atxn1P54254 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Atxn1P54254 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atxn1P54254 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Atxn1P54254 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Atxn1P54254 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.49□□□□□ -0.41
Atxn1P54254 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.49□□□□□ -0.41
Atxn1P54254 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Atxn1P54254 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Atxn1P54254 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.49□□□□□ -0.41
Atxn1P54254 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.49□□□□□ -0.41
Atxn1P54254 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.49□□□□□ -0.41
Atxn1P54254 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Gm6458-201ENSMUST00000211573 635 ntBASIC12.49□□□□□ -0.41
Atxn1P54254 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.49□□□□□ -0.41
Atxn1P54254 Gm18041-201ENSMUST00000218210 618 ntBASIC12.49□□□□□ -0.41
Atxn1P54254 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.49□□□□□ -0.41
Atxn1P54254 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Atxn1P54254 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Atxn1P54254 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Atxn1P54254 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Atxn1P54254 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Atxn1P54254 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.49□□□□□ -0.41
Atxn1P54254 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atxn1P54254 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Atxn1P54254 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.48□□□□□ -0.41
Atxn1P54254 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.48□□□□□ -0.41
Atxn1P54254 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.48□□□□□ -0.41
Atxn1P54254 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.48□□□□□ -0.41
Atxn1P54254 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atxn1P54254 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms