Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cxcl12P40224 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cxcl12P40224 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Cxcl12P40224 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.88□□□□□ -0.35
Cxcl12P40224 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Cxcl12P40224 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.88□□□□□ -0.35
Cxcl12P40224 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.88□□□□□ -0.35
Cxcl12P40224 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.88□□□□□ -0.35
Cxcl12P40224 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.88□□□□□ -0.35
Cxcl12P40224 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.88□□□□□ -0.35
Cxcl12P40224 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.88□□□□□ -0.35
Cxcl12P40224 Gm6485-201ENSMUST00000160676 439 ntBASIC12.88□□□□□ -0.35
Cxcl12P40224 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.88□□□□□ -0.35
Cxcl12P40224 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Gm44958-201ENSMUST00000203734 736 ntBASIC12.88□□□□□ -0.35
Cxcl12P40224 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.88□□□□□ -0.35
Cxcl12P40224 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.88□□□□□ -0.35
Cxcl12P40224 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.88□□□□□ -0.35
Cxcl12P40224 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.88□□□□□ -0.35
Cxcl12P40224 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Cxcl12P40224 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.88□□□□□ -0.35
Cxcl12P40224 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cxcl12P40224 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Cxcl12P40224 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.88□□□□□ -0.35
Cxcl12P40224 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Cxcl12P40224 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cxcl12P40224 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.87□□□□□ -0.35
Cxcl12P40224 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.87□□□□□ -0.35
Cxcl12P40224 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cxcl12P40224 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cxcl12P40224 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cxcl12P40224 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Cxcl12P40224 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cxcl12P40224 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.87□□□□□ -0.35
Cxcl12P40224 Gm8737-201ENSMUST00000122208 642 ntBASIC12.87□□□□□ -0.35
Cxcl12P40224 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.87□□□□□ -0.35
Cxcl12P40224 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cxcl12P40224 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cxcl12P40224 Gm28686-201ENSMUST00000187404 609 ntBASIC12.87□□□□□ -0.35
Cxcl12P40224 Gm37299-201ENSMUST00000193951 826 ntBASIC12.87□□□□□ -0.35
Cxcl12P40224 Gm9645-201ENSMUST00000197131 792 ntBASIC12.87□□□□□ -0.35
Cxcl12P40224 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.87□□□□□ -0.35
Cxcl12P40224 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cxcl12P40224 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cxcl12P40224 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cxcl12P40224 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.87□□□□□ -0.35
Cxcl12P40224 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cxcl12P40224 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cxcl12P40224 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cxcl12P40224 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cxcl12P40224 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.87□□□□□ -0.35
Cxcl12P40224 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cxcl12P40224 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cxcl12P40224 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.87□□□□□ -0.35
Cxcl12P40224 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cxcl12P40224 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cxcl12P40224 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.87□□□□□ -0.35
Cxcl12P40224 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cxcl12P40224 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.87□□□□□ -0.35
Cxcl12P40224 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Cxcl12P40224 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Cxcl12P40224 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Cxcl12P40224 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cxcl12P40224 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms