Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chd1P40201 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd1P40201 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd1P40201 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Chd1P40201 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
Chd1P40201 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chd1P40201 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chd1P40201 Gm11996-201ENSMUST00000117538 915 ntBASIC18.39■□□□□ 0.53
Chd1P40201 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chd1P40201 Gm6606-201ENSMUST00000193613 947 ntBASIC18.39■□□□□ 0.53
Chd1P40201 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chd1P40201 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd1P40201 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd1P40201 AC154262.2-201ENSMUST00000224310 2293 ntBASIC18.39■□□□□ 0.53
Chd1P40201 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd1P40201 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chd1P40201 Gm44851-201ENSMUST00000205735 2309 ntBASIC18.39■□□□□ 0.53
Chd1P40201 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd1P40201 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd1P40201 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chd1P40201 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd1P40201 Mir1905-201ENSMUST00000122779 82 ntBASIC18.38■□□□□ 0.53
Chd1P40201 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chd1P40201 Gm9081-201ENSMUST00000182346 991 ntBASIC18.38■□□□□ 0.53
Chd1P40201 Gm9192-201ENSMUST00000183221 985 ntBASIC18.38■□□□□ 0.53
Chd1P40201 Gm45527-201ENSMUST00000211052 774 ntBASIC18.38■□□□□ 0.53
Chd1P40201 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC18.38■□□□□ 0.53
Chd1P40201 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chd1P40201 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd1P40201 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd1P40201 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd1P40201 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chd1P40201 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd1P40201 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd1P40201 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chd1P40201 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
Chd1P40201 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd1P40201 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd1P40201 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd1P40201 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd1P40201 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd1P40201 Smok4a-201ENSMUST00000074512 1455 ntBASIC18.38■□□□□ 0.53
Chd1P40201 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Chd1P40201 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Chd1P40201 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Chd1P40201 Gm25554-201ENSMUST00000158075 113 ntBASIC18.37■□□□□ 0.53
Chd1P40201 Gm44216-201ENSMUST00000203942 157 ntBASIC18.37■□□□□ 0.53
Chd1P40201 Gm45310-201ENSMUST00000210436 275 ntBASIC18.37■□□□□ 0.53
Chd1P40201 Gm6331-201ENSMUST00000217890 450 ntBASIC18.37■□□□□ 0.53
Chd1P40201 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Chd1P40201 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Chd1P40201 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd1P40201 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd1P40201 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chd1P40201 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.37■□□□□ 0.53
Chd1P40201 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chd1P40201 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd1P40201 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chd1P40201 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd1P40201 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd1P40201 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd1P40201 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd1P40201 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd1P40201 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd1P40201 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd1P40201 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC18.37■□□□□ 0.53
Chd1P40201 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC18.37■□□□□ 0.53
Chd1P40201 AC154305.2-201ENSMUST00000225813 901 ntBASIC18.37■□□□□ 0.53
Chd1P40201 AC142266.1-201ENSMUST00000228107 415 ntBASIC18.37■□□□□ 0.53
Chd1P40201 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC18.37■□□□□ 0.53
Chd1P40201 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chd1P40201 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chd1P40201 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd1P40201 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC18.36■□□□□ 0.53
Chd1P40201 Gm6641-201ENSMUST00000196100 1315 ntBASIC18.36■□□□□ 0.53
Chd1P40201 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1P40201 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1P40201 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1P40201 AC093022.4-203ENSMUST00000228523 2657 ntBASIC18.36■□□□□ 0.53
Chd1P40201 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC18.36■□□□□ 0.53
Chd1P40201 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC18.36■□□□□ 0.53
Chd1P40201 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC18.36■□□□□ 0.53
Chd1P40201 Gm4034-201ENSMUST00000187674 480 ntBASIC18.36■□□□□ 0.53
Chd1P40201 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1P40201 Gm18035-201ENSMUST00000211962 589 ntBASIC18.36■□□□□ 0.53
Chd1P40201 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1P40201 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1P40201 Gm45199-201ENSMUST00000207640 1507 ntBASIC18.36■□□□□ 0.53
Chd1P40201 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1P40201 Gm37513-201ENSMUST00000194830 2268 ntBASIC18.36■□□□□ 0.53
Chd1P40201 Gm38378-201ENSMUST00000195153 2268 ntBASIC18.36■□□□□ 0.53
Chd1P40201 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1P40201 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1P40201 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1P40201 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Chd1P40201 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC18.35■□□□□ 0.53
Chd1P40201 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Chd1P40201 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC18.35■□□□□ 0.53
Chd1P40201 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC18.35■□□□□ 0.53
Chd1P40201 Gm17825-201ENSMUST00000206836 794 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms