Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.05□□□□□ -0.48
Cdh4P39038 Gm29396-201ENSMUST00000185659 716 ntBASIC12.05□□□□□ -0.48
Cdh4P39038 Gm38158-201ENSMUST00000194617 339 ntBASIC12.05□□□□□ -0.48
Cdh4P39038 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.05□□□□□ -0.48
Cdh4P39038 Gm10608-202ENSMUST00000213924 676 ntBASIC12.05□□□□□ -0.48
Cdh4P39038 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdh4P39038 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdh4P39038 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cdh4P39038 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.05□□□□□ -0.48
Cdh4P39038 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.05□□□□□ -0.48
Cdh4P39038 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdh4P39038 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdh4P39038 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Cdh4P39038 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdh4P39038 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Cdh4P39038 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdh4P39038 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.04□□□□□ -0.48
Cdh4P39038 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Cdh4P39038 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdh4P39038 Gm13786-201ENSMUST00000122371 333 ntBASIC12.04□□□□□ -0.48
Cdh4P39038 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdh4P39038 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.04□□□□□ -0.48
Cdh4P39038 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdh4P39038 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdh4P39038 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.04□□□□□ -0.48
Cdh4P39038 Olfr284-202ENSMUST00000206647 966 ntBASIC12.04□□□□□ -0.48
Cdh4P39038 Gm18935-201ENSMUST00000212692 664 ntBASIC12.04□□□□□ -0.48
Cdh4P39038 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.04□□□□□ -0.48
Cdh4P39038 Gm45925-201ENSMUST00000218882 744 ntBASIC12.04□□□□□ -0.48
Cdh4P39038 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cdh4P39038 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Cdh4P39038 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdh4P39038 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.04□□□□□ -0.48
Cdh4P39038 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdh4P39038 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cdh4P39038 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.03□□□□□ -0.48
Cdh4P39038 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.03□□□□□ -0.48
Cdh4P39038 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Cdh4P39038 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh4P39038 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdh4P39038 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms