Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
LdlrP35951 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LdlrP35951 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
LdlrP35951 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LdlrP35951 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LdlrP35951 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LdlrP35951 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
LdlrP35951 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
LdlrP35951 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LdlrP35951 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LdlrP35951 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LdlrP35951 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LdlrP35951 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LdlrP35951 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.52□□□□□ -0.41
LdlrP35951 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LdlrP35951 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LdlrP35951 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.52□□□□□ -0.41
LdlrP35951 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LdlrP35951 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.51□□□□□ -0.41
LdlrP35951 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.51□□□□□ -0.41
LdlrP35951 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.51□□□□□ -0.41
LdlrP35951 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.51□□□□□ -0.41
LdlrP35951 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LdlrP35951 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
LdlrP35951 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.51□□□□□ -0.41
LdlrP35951 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.51□□□□□ -0.41
LdlrP35951 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LdlrP35951 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.51□□□□□ -0.41
LdlrP35951 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Gm27390-201ENSMUST00000184516 176 ntBASIC12.51□□□□□ -0.41
LdlrP35951 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.51□□□□□ -0.41
LdlrP35951 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.51□□□□□ -0.41
LdlrP35951 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LdlrP35951 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.51□□□□□ -0.41
LdlrP35951 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.51□□□□□ -0.41
LdlrP35951 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LdlrP35951 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.51□□□□□ -0.41
LdlrP35951 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.51□□□□□ -0.41
LdlrP35951 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LdlrP35951 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.5□□□□□ -0.41
LdlrP35951 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
LdlrP35951 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Gm16177-201ENSMUST00000120728 718 ntBASIC12.5□□□□□ -0.41
LdlrP35951 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.5□□□□□ -0.41
LdlrP35951 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Gm28693-202ENSMUST00000190758 331 ntBASIC12.5□□□□□ -0.41
LdlrP35951 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.5□□□□□ -0.41
LdlrP35951 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.5□□□□□ -0.41
LdlrP35951 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.5□□□□□ -0.41
LdlrP35951 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Mir339-201ENSMUST00000083659 96 ntBASIC12.5□□□□□ -0.41
LdlrP35951 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
LdlrP35951 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LdlrP35951 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 170.6 ms