Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sftpa1P35242 Acot6-202ENSMUST00000222921 3622 ntBASIC11.6□□□□□ -0.55
Sftpa1P35242 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sftpa1P35242 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sftpa1P35242 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sftpa1P35242 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sftpa1P35242 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sftpa1P35242 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.59□□□□□ -0.55
Sftpa1P35242 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Sftpa1P35242 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sftpa1P35242 Gm12314-201ENSMUST00000118104 538 ntBASIC11.59□□□□□ -0.55
Sftpa1P35242 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.59□□□□□ -0.55
Sftpa1P35242 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.59□□□□□ -0.55
Sftpa1P35242 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.59□□□□□ -0.55
Sftpa1P35242 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.59□□□□□ -0.55
Sftpa1P35242 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sftpa1P35242 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.59□□□□□ -0.55
Sftpa1P35242 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Sftpa1P35242 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.59□□□□□ -0.55
Sftpa1P35242 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.59□□□□□ -0.55
Sftpa1P35242 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.59□□□□□ -0.55
Sftpa1P35242 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Sftpa1P35242 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.59□□□□□ -0.55
Sftpa1P35242 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.59□□□□□ -0.55
Sftpa1P35242 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sftpa1P35242 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sftpa1P35242 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.55
Sftpa1P35242 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sftpa1P35242 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Sftpa1P35242 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.58□□□□□ -0.55
Sftpa1P35242 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sftpa1P35242 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sftpa1P35242 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sftpa1P35242 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.58□□□□□ -0.56
Sftpa1P35242 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sftpa1P35242 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Sftpa1P35242 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Sftpa1P35242 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.58□□□□□ -0.56
Sftpa1P35242 Gm14460-201ENSMUST00000121511 639 ntBASIC11.58□□□□□ -0.56
Sftpa1P35242 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.58□□□□□ -0.56
Sftpa1P35242 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.58□□□□□ -0.56
Sftpa1P35242 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Sftpa1P35242 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Sftpa1P35242 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.58□□□□□ -0.56
Sftpa1P35242 Gm43916-201ENSMUST00000205062 967 ntBASIC11.58□□□□□ -0.56
Sftpa1P35242 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sftpa1P35242 Gm7600-201ENSMUST00000209657 785 ntBASIC11.58□□□□□ -0.56
Sftpa1P35242 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.58□□□□□ -0.56
Sftpa1P35242 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.58□□□□□ -0.56
Sftpa1P35242 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sftpa1P35242 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sftpa1P35242 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms