Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nedd8P29595 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.57□□□□□ -0.56
Nedd8P29595 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nedd8P29595 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nedd8P29595 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nedd8P29595 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nedd8P29595 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nedd8P29595 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nedd8P29595 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nedd8P29595 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.56□□□□□ -0.56
Nedd8P29595 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nedd8P29595 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.56□□□□□ -0.56
Nedd8P29595 Gm12585-201ENSMUST00000117307 290 ntBASIC11.56□□□□□ -0.56
Nedd8P29595 Gm6447-201ENSMUST00000118905 835 ntBASIC11.56□□□□□ -0.56
Nedd8P29595 Mir3113-201ENSMUST00000175478 76 ntBASIC11.56□□□□□ -0.56
Nedd8P29595 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.56□□□□□ -0.56
Nedd8P29595 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.56□□□□□ -0.56
Nedd8P29595 Shd-206ENSMUST00000225145 998 ntBASIC11.56□□□□□ -0.56
Nedd8P29595 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nedd8P29595 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Nedd8P29595 Gm24447-201ENSMUST00000083977 338 ntBASIC11.56□□□□□ -0.56
Nedd8P29595 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nedd8P29595 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.56□□□□□ -0.56
Nedd8P29595 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.56□□□□□ -0.56
Nedd8P29595 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nedd8P29595 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.56□□□□□ -0.56
Nedd8P29595 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nedd8P29595 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nedd8P29595 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nedd8P29595 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.56□□□□□ -0.56
Nedd8P29595 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nedd8P29595 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nedd8P29595 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Nedd8P29595 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.55□□□□□ -0.56
Nedd8P29595 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nedd8P29595 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.55□□□□□ -0.56
Nedd8P29595 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.55□□□□□ -0.56
Nedd8P29595 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.55□□□□□ -0.56
Nedd8P29595 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Nedd8P29595 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Nedd8P29595 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.55□□□□□ -0.56
Nedd8P29595 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.55□□□□□ -0.56
Nedd8P29595 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.55□□□□□ -0.56
Nedd8P29595 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.55□□□□□ -0.56
Nedd8P29595 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nedd8P29595 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.55□□□□□ -0.56
Nedd8P29595 Gm46209-201ENSMUST00000217912 553 ntBASIC11.55□□□□□ -0.56
Nedd8P29595 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Nedd8P29595 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Gm5161-201ENSMUST00000075243 853 ntBASIC11.55□□□□□ -0.56
Nedd8P29595 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nedd8P29595 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.55□□□□□ -0.56
Nedd8P29595 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Nedd8P29595 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Nedd8P29595 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.55□□□□□ -0.56
Nedd8P29595 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Nedd8P29595 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nedd8P29595 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Nedd8P29595 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.54□□□□□ -0.56
Nedd8P29595 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Nedd8P29595 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nedd8P29595 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nedd8P29595 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.54□□□□□ -0.56
Nedd8P29595 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms