Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.42□□□□□ -0.26
Mmp3P28862 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.42□□□□□ -0.26
Mmp3P28862 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Mmp3P28862 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.42□□□□□ -0.26
Mmp3P28862 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Mmp3P28862 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Gm14760-201ENSMUST00000121831 999 ntBASIC13.42□□□□□ -0.26
Mmp3P28862 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.42□□□□□ -0.26
Mmp3P28862 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Mmp3P28862 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.42□□□□□ -0.26
Mmp3P28862 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Mmp3P28862 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.42□□□□□ -0.26
Mmp3P28862 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.42□□□□□ -0.26
Mmp3P28862 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.42□□□□□ -0.26
Mmp3P28862 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.42□□□□□ -0.26
Mmp3P28862 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp3P28862 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Mmp3P28862 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Mmp3P28862 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.41□□□□□ -0.26
Mmp3P28862 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.41□□□□□ -0.26
Mmp3P28862 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Mmp3P28862 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Mmp3P28862 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.41□□□□□ -0.26
Mmp3P28862 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.41□□□□□ -0.26
Mmp3P28862 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Mmp3P28862 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.41□□□□□ -0.26
Mmp3P28862 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Mmp3P28862 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.41□□□□□ -0.26
Mmp3P28862 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Mmp3P28862 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.41□□□□□ -0.26
Mmp3P28862 Nsd1-205ENSMUST00000224693 852 ntBASIC13.41□□□□□ -0.26
Mmp3P28862 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Mmp3P28862 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Mmp3P28862 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.41□□□□□ -0.26
Mmp3P28862 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp3P28862 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp3P28862 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Mmp3P28862 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp3P28862 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp3P28862 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp3P28862 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp3P28862 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp3P28862 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp3P28862 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp3P28862 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp3P28862 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Mmp3P28862 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.4□□□□□ -0.26
Mmp3P28862 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.4□□□□□ -0.26
Mmp3P28862 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp3P28862 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp3P28862 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp3P28862 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms