Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1bP25119 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1bP25119 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1bP25119 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1bP25119 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1bP25119 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1bP25119 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1bP25119 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf1bP25119 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf1bP25119 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf1bP25119 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf1bP25119 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf1bP25119 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf1bP25119 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf1bP25119 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf1bP25119 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.65□□□□□ -0.55
Tnfrsf1bP25119 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Gm4986-201ENSMUST00000119731 549 ntBASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Gm15703-201ENSMUST00000120250 880 ntBASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Rmrp-201ENSMUST00000157463 271 ntBASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Gm7046-201ENSMUST00000221351 977 ntBASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1bP25119 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Gm12241-201ENSMUST00000118330 726 ntBASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Gm45331-201ENSMUST00000209868 554 ntBASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Gm9368-201ENSMUST00000219348 831 ntBASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 CT009764.1-201ENSMUST00000222260 483 ntBASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfrsf1bP25119 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms