Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf1aP25118 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.53□□□□□ -0.72
Tnfrsf1aP25118 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf1aP25118 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf1aP25118 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.53□□□□□ -0.72
Tnfrsf1aP25118 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf1aP25118 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.53□□□□□ -0.72
Tnfrsf1aP25118 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf1aP25118 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.53□□□□□ -0.72
Tnfrsf1aP25118 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf1aP25118 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf1aP25118 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf1aP25118 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf1aP25118 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf1aP25118 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf1aP25118 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf1aP25118 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf1aP25118 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.52□□□□□ -0.72
Tnfrsf1aP25118 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf1aP25118 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf1aP25118 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Tnfrsf1aP25118 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf1aP25118 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Tnfrsf1aP25118 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf1aP25118 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf1aP25118 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf1aP25118 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Tnfrsf1aP25118 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf1aP25118 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf1aP25118 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Gm14127-201ENSMUST00000117906 678 ntBASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Gm43433-201ENSMUST00000196573 481 ntBASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Gm4768-201ENSMUST00000206199 686 ntBASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Gm29705-201ENSMUST00000212598 474 ntBASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Gm19163-201ENSMUST00000223313 780 ntBASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1aP25118 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Gm27331-201ENSMUST00000183705 60 ntBASIC10.51□□□□□ -0.73
Tnfrsf1aP25118 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms